.coveragerc
.flake8
.gitignore
.pre-commit-config.yaml
CHANGELOG.md
LICENSE
MANIFEST.in
Makefile
MergeTree.cpp
MergeTree.h
MorseComplex.cpp
MorseComplex.h
README.rst
UnionFind.cpp
UnionFind.h
pyproject.toml
setup.cfg
setup.py
topology.i
topology_wrap.cpp
tox.ini
utils.cpp
utils.h
.github/workflows/publish.yaml
.github/workflows/quality.yaml
.github/workflows/test.yaml
docs/Makefile
docs/api.rst
docs/conf.py
docs/index.rst
docs/install.rst
docs/license.rst
docs/make.bat
docs/usage.rst
docs/_static/background.png
docs/_static/logo_generator.py
docs/_static/topopy.png
topopy/ContourTree.py
topopy/MergeTree.py
topopy/MorseComplex.py
topopy/MorseSmaleComplex.py
topopy/TopologicalObject.py
topopy/__init__.py
topopy/topology.py
topopy.egg-info/PKG-INFO
topopy.egg-info/SOURCES.txt
topopy.egg-info/dependency_links.txt
topopy.egg-info/requires.txt
topopy.egg-info/top_level.txt
topopy/tests/__init__.py
topopy/tests/mc_gold.json
topopy/tests/msc_gold.json
topopy/tests/test_ct.py
topopy/tests/test_functions.py
topopy/tests/test_mc.py
topopy/tests/test_msc.py
topopy/tests/test_mt.py
topopy/tests/test_to.py