CONTRIBUTING.md
LICENSE
MANIFEST.in
README.md
setup.cfg
setup.py
docs/Makefile
docs/conf.py
docs/contributing.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/modules.rst
docs/simulariumio.cytosim.rst
docs/simulariumio.data_objects.rst
docs/simulariumio.filters.rst
docs/simulariumio.mcell.rst
docs/simulariumio.md.rst
docs/simulariumio.medyan.rst
docs/simulariumio.physicell.dep.rst
docs/simulariumio.physicell.rst
docs/simulariumio.plot_readers.rst
docs/simulariumio.readdy.rst
docs/simulariumio.rst
docs/simulariumio.smoldyn.rst
docs/simulariumio.springsalad.rst
docs/simulariumio.writers.rst
examples/__init__.py
simulariumio/__init__.py
simulariumio/constants.py
simulariumio/exceptions.py
simulariumio/file_converter.py
simulariumio/trajectory_converter.py
simulariumio.egg-info/PKG-INFO
simulariumio.egg-info/SOURCES.txt
simulariumio.egg-info/dependency_links.txt
simulariumio.egg-info/not-zip-safe
simulariumio.egg-info/requires.txt
simulariumio.egg-info/top_level.txt
simulariumio/cellpack/__init__.py
simulariumio/cellpack/cellpack_converter.py
simulariumio/cellpack/cellpack_data.py
simulariumio/cytosim/__init__.py
simulariumio/cytosim/cytosim_converter.py
simulariumio/cytosim/cytosim_data.py
simulariumio/cytosim/cytosim_object_info.py
simulariumio/data_objects/__init__.py
simulariumio/data_objects/agent_data.py
simulariumio/data_objects/camera_data.py
simulariumio/data_objects/dimension_data.py
simulariumio/data_objects/display_data.py
simulariumio/data_objects/histogram_plot_data.py
simulariumio/data_objects/input_file_data.py
simulariumio/data_objects/meta_data.py
simulariumio/data_objects/model_meta_data.py
simulariumio/data_objects/scatter_plot_data.py
simulariumio/data_objects/trajectory_data.py
simulariumio/data_objects/unit_data.py
simulariumio/filters/__init__.py
simulariumio/filters/add_agents_filter.py
simulariumio/filters/every_nth_agent_filter.py
simulariumio/filters/every_nth_subpoint_filter.py
simulariumio/filters/every_nth_timestep_filter.py
simulariumio/filters/filter.py
simulariumio/filters/multiply_space_filter.py
simulariumio/filters/multiply_time_filter.py
simulariumio/filters/transform_spatial_axes_filter.py
simulariumio/filters/translate_filter.py
simulariumio/mcell/__init__.py
simulariumio/mcell/mcell_converter.py
simulariumio/mcell/mcell_data.py
simulariumio/md/__init__.py
simulariumio/md/md_converter.py
simulariumio/md/md_data.py
simulariumio/medyan/__init__.py
simulariumio/medyan/medyan_converter.py
simulariumio/medyan/medyan_data.py
simulariumio/physicell/__init__.py
simulariumio/physicell/physicell_converter.py
simulariumio/physicell/physicell_data.py
simulariumio/physicell/dep/__init__.py
simulariumio/physicell/dep/pyMCDS.py
simulariumio/plot_readers/__init__.py
simulariumio/plot_readers/histogram_plot_reader.py
simulariumio/plot_readers/plot_reader.py
simulariumio/plot_readers/scatter_plot_reader.py
simulariumio/readdy/__init__.py
simulariumio/readdy/readdy_converter.py
simulariumio/readdy/readdy_data.py
simulariumio/readers/__init__.py
simulariumio/readers/binary_info.py
simulariumio/readers/simularium_binary_reader.py
simulariumio/smoldyn/__init__.py
simulariumio/smoldyn/smoldyn_converter.py
simulariumio/smoldyn/smoldyn_data.py
simulariumio/springsalad/__init__.py
simulariumio/springsalad/springsalad_converter.py
simulariumio/springsalad/springsalad_data.py
simulariumio/writers/__init__.py
simulariumio/writers/binary_chunk.py
simulariumio/writers/binary_values.py
simulariumio/writers/binary_writer.py
simulariumio/writers/json_writer.py
simulariumio/writers/writer.py