MANIFEST.in
README.md
setup.py
peppercompiler/DNA_classes.py
peppercompiler/DNAfold.py
peppercompiler/DNAfold_Nupack.py
peppercompiler/DNAfold_Vienna.py
peppercompiler/DotParen_grammar.py
peppercompiler/HU2dotParen.py
peppercompiler/HU_grammar.py
peppercompiler/RNAfold_grammar.py
peppercompiler/__init__.py
peppercompiler/_spuriousSSM
peppercompiler/_spuriousSSM_wrapper.py
peppercompiler/compiler.py
peppercompiler/component_class.py
peppercompiler/component_parser.py
peppercompiler/component_parser_pyparsing.py
peppercompiler/component_parser_regex.py
peppercompiler/exDotParen_grammar.py
peppercompiler/finish.py
peppercompiler/kinetics.py
peppercompiler/multihelp.py
peppercompiler/multistrand.py
peppercompiler/myStat.py
peppercompiler/new_loading.py
peppercompiler/nupack_mfe_grammar.py
peppercompiler/nupack_out_grammar.py
peppercompiler/quickargs.py
peppercompiler/system_class.py
peppercompiler/system_parser.py
peppercompiler/system_parser_pyparsing.py
peppercompiler/test.py
peppercompiler/utils.py
peppercompiler/var_substitute.py
peppercompiler.egg-info/PKG-INFO
peppercompiler.egg-info/SOURCES.txt
peppercompiler.egg-info/dependency_links.txt
peppercompiler.egg-info/entry_points.txt
peppercompiler.egg-info/requires.txt
peppercompiler.egg-info/top_level.txt
peppercompiler/design/DNA_nupack_classes.py
peppercompiler/design/PIL_DNA_classes.py
peppercompiler/design/PIL_class.py
peppercompiler/design/PIL_parser.py
peppercompiler/design/__init__.py
peppercompiler/design/avoid.py
peppercompiler/design/avoid_design.py
peppercompiler/design/constraint_load.py
peppercompiler/design/constraints.py
peppercompiler/design/find_file.py
peppercompiler/design/new_loading.py
peppercompiler/design/nupack_in_class.py
peppercompiler/design/nupack_in_parser.py
peppercompiler/design/random_design.py
peppercompiler/design/spurious_design.py